SoftwareΒΆ
giptools provides the following software installed in ubuntu xenial.
Ubuntu xenial is covered by the Creative Commons CC-BY-SA version 3.0 UK licence
Links to download the software source code are provided and accessible to general public.
Source code of third party software is available from giptools at the container location /opt/source_code
The license and copyright notice of the tools are also available from giptools at the container location /opt/licenses.tar.gz
Additionally giptools includes the following R packages: ape, argparse, Biostrings, bisoreg, data.table, dplyr, entropy, FactoMineR, fastcluster, fields, fitdistrplus, GenomicRanges, ggExtra, ggplot2, ggridges, ggtern, ggtree, gplots, gridExtra, gtools, igraph, IRanges, karyoploteR, knitr, MASS, MCL, mclust, mixtools, networkD3, openxlsx, pheatmap, plot3D, png, RColorBrewer, reshape2, scales, seqLogo, session, VariantAnnotation, venn,
These packages and their dependencies are available at the container location: /usr/local/lib/R/library/
